Ancient Retroviruses and Modern Cancer: Role of Endogenous Retroviruses in Transcriptional Changes in Tumor Cells 

Approximately 30 million years ago, a retrovirus integrated into the germline of a common ancestor of baboons, gorillas, chimpanzees and humans. That endogenous retrovirus, now known as gammaretrovirus human endogenous retrovirus 1 (HERV-1), may provide clues about the aberrant regulation of gene transcription that enables tumor cells to grow and survive.  

Understanding the Mechanism Behind Cancer Gene Expression 

Scientists have long described the striking differences in gene expression, signaling activity and metabolism between cancer cells and normal cells, but the underlying mechanisms that cause these differences are not fully understood. In a recent Science Advances article, published by Ivancevic et al., researchers from the University of Colorado, Boulder; the University of Colorado Anschutz Medical Campus, and the University of Colorado School of Medicine report their efforts to identify endogenous retrovirus elements that might be part of the answer to the complex question of what biological events are responsible for the changes in gene expression in cancer cells.  

The researchers hypothesized that transposable elements (TEs), specifically those associated with endogenous retroviruses could be involved in cancer-specific gene regulation.  Endogenous retroviruses (ERVs) are the remnants of ancient retroviral infections that have integrated into the germline of the host. 

The transposable element LTR10, derived from an endogenous retrovirus, can alter gene expression in a number of cancers. Artist's conception of an invasive cancer cell.

Identifying Endogenous Retrovirus Elements That Affect Cancer Gene Expression 

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A Peek Behind the Scenes: Young Researchers Visit Promega Madison

Young Researcher Award recipients 2024
Young Researcher Award winners Alexandre Lalande, Margaux Cochard and Emmanuel Heilman (L to R) visited Promega Madison in June 2024.

Earlier this summer, Promega Madison welcomed three rising researchers from Europe for an immersive experience on the company’s main campus. Alexandre Lalande (PhD student, International Center for Infectiology Research, France), Margaux Cochard (Post-Doc, University of the Littoral Opal Coast, France) and Emmanuel Heilman (Post-Doc, Medical University of Innsbruck) were selected as Young Researcher Award winners by Promega France and Promega Germany. Their prize trip to the United States included tours of Promega facilities, conversations with Promega leaders and research scientists and hands-on training with emerging technologies.

“It’s really interesting to see how Promega manages to find harmony between the science, the people and the business,” Alexandre says. “When you arrive here you immediately feel comfortable.”

Meeting Industry Scientists

Alexandre says that he has always imagined himself working in academia doing basic research, but he never totally ruled out opportunities in industry.

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The Marvel of Malate: A Crucial Component in Cellular Energy Metabolism

Today’s blog written by guest author Kim Haupt.

Cellular energy metabolism is a complex biological process that relies on a suite of metabolites, each with distinct roles to maintain. Malate is one of these metabolites and is essential for maintaining cellular function through important roles in both energy production and redox homeostasis. In this blog, we highlight malate’s diverse roles and uncover some of its connections to human disease. 

Illustration of energy metablism in cell.
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Streamlining Plant Pathogen Detection: Valto Biocontrol’s Integration of Promega High-Throughput Nucleic Acid Extraction Platform

This review summarizes Valto Biocontrol’s move toward a high-throughput (HT) nucleic acid extraction solution utilizing Promega Maxwell® HT simplyRNA Kit, Custom. This project was initiated by Dr. Menno Westerdijk, Head of Laboratories at Valto Biocontrol, who established a molecular laboratory onsite. The Promega Field Support Scientist team assisted Dr. Westerdijk to develop an automated nucleic acid solution using their existing KingFisher™ Flex robot. Dr. Westerdijk’s extensive experience working with KingFisher robots in the agricultural sector combined with expert guidance from Promega Field Support enabled a seamless implementation of the Maxwell® HT chemistry for his laboratory.

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How Promega Supports Sustainable Science

What is ACT and why does it matter?

The ACT label stands for Accountability, Consistency and Transparency. The ACT label provides information on the environmental impact of life science products to help researchers make informed choices about the products they use in their labs. ACT was developed by the non-profit organization My Green Lab, in collaboration with the International Institute for Sustainable Laboratories (I2SL).

The ACT label is one of the most comprehensive product labels for the life sciences. It measures the environmental impact of a product across four categories: manufacturing, user impact, end of life, and innovation. The criterion was developed with input from industry leaders, scientists, manufacturers, and sustainability directors. Most categories are scored on a scale from 1 to 10; 10 being the highest score. Other values are assigned a yes/no value or in some instances, a specific value per day (ex. kWh/day). The Environmental Impact Factor (EIF) is the summation of these categories. The varying energy usage and distinct reports across global markets has resulted in separate awards for different world regions. By choosing products with the ACT label, researchers can align their purchasing behaviors with any goals of reducing their environmental footprint and support sustainable practices in the life science industry.

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The Casual Catalyst: Science Conversations and Cafes

There is no shortage of stories about great scientific collaborations that have taken root as the result of an excited conversation between two scientists over sandwiches and beer at a bar or a deli. One of the most famous examples of such a conversation was that between Herbert Boyer and Stanley Cohen when they attended a conference on bacterial plasmids in 1972—that very conversation led to the formation of the biotechnology field as the two scientists worked together to clone specific regions of DNA (1).  

“Over hot pastrami and corned beef sandwiches, Herbert Boyer and Stanley Cohen opened the door to genetic engineering and laid the foundations for gene therapy and the biotechnology industry.”  

Steven Johnson, author of Where Do Good Ideas Come From, credits the English coffee house as being crucial to the spread of the enlightenment movement in the 17th and 18th centuries (2). He argues that coffee houses provide a space where ideas can come together and form networks. In fact, he defines the concept of “idea” not as a single entity—a grand thought that poofs into existence upon hard work—but at its simplest level, a new idea is a new network of neurons firing in sync with each other.  

Johnson further argues that the development of great new ideas not only requires a space for ideas to bump into each other, connect and form a network, but also that great ideas are rarely the product of a single “Eureka” moment. Rather, they are slowly developing, churning hunches that have very long incubation periods (2).  

Science is Ripe with “Coffee House” Discoveries

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Elephants May Call Each Other By Name

Elephants intertwining trunks
New research points to the possible use of names among elephants in the African savanna

Names are part of something called “arbitrary communication”, wherein a sound represents an idea without imitating it. Where we have so far seen names used in nature, they are typically imitative—for instance, bottlenose dolphins and parrots mimic an individual’s signature call to get their attention. However, this differs from how humans refer to each other using an arbitrary or random sound chosen to represent an individual. The use of arbitrary language is a mark of linguistic complexity that moves beyond the limitations of imitative speech and expands expressive power into the potential exchange of intricate ideas, abstract concepts and symbolic thought.

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The Battle of Shiloh’s Angel’s Glow: Fact, Civil War Legend or Modern Myth? 

It sounds like the script for a Hollywood movie. The story, first appearing in 2001, begins with a purported civil war legend from the Battle of Shiloh. The legend said that the wounds of some soldiers glowed (faintly) in the dark. Soldiers with these glowing wounds were more apt to survive, giving the phenomenon the name “Angels Glow”. The story ends with two curious teenagers solving the mystery using their science fair project. They identify infection by the bioluminescent bacteria Photorhabdus luminescens (formerly Xenorhabdus luminescens) as the likely cause of the glowing wounds. P. luminescens produces bacteriocins (antimicrobial peptides), which the teenagers attribute to helping keep other infections at bay, resulting in the improved survival rate for the soldiers whose wounds glowed.

The teenagers win. The mystery is solved. The credits roll. 

Except life (and science) is rarely as simple as a summer block buster. 

Cannon at sunset on a civil war battlefield
The Battle of Shiloh took place in Hardin County Tennessee on April 6th and 7th, 1862.
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Targeting Dark Kinases for Non-Hormonal, Reversible Male Contraceptives

Contraception, or birth control, is an important tool in family planning. Given the fourfold increase in population over the last century1 there is a clear need for more affordable, reversible, and safe methods of contraception. At present, the responsibility of taking contraceptives falls largely on people with female reproductive organs as there is no current method of birth control for people with male reproductive organs. The search for a non-hormonal, male birth control has been an elusive goal in the field of reproductive health.

A complex, futuristic scene within the outline of a pill.

Recently, a group of scientists from Baylor College of Medicine with contributions from Promega scientists identified a novel compound that 1) inhibits a specific kinase and 2) functions as a reversible male contraceptive. The kinase targeted in this study is the serine/threonine kinase 33 (STK33); a genetic knockout of this gene in male mice is known to cause sterility. The team published their work in Science and utilized a suite of approaches—including DNA-Encoded Libraries (DELs), crystallography, and cellular NanoBRET™ Target Engagement Kinase Assays—to discover a potent inhibitor of STK33 (CDD-2807).  The CDD-2807 inhibitor has shown promising results in inducing reversible contraception in male mice, marking a significant milestone in the development of non-hormonal contraceptive options. Let’s dive into the foundation, novel methodology, collaboration, and implications for this work.

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The Largest Known Genome: Unveiling Nature’s Genetic Giant 

In genetics, sizes often come with surprises. One tiny fern, Tmesipteris oblanceolata, also known as the Fork Fern, proved this phrase true, taking the scientific community by storm when it broke the record for the largest known genome. Researchers reported this discovery on May 31, 2024, stating that the plant, which is small enough to fit in the palm of your hand, harbors a full set of genetic instructions over 50 times the size of the human genome.

Tropical rainforest in New Caledonia with ferns and moss-covered trees
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