Molecular Connections Between Sleep Deprivation and Inflammation

Anyone who has travelled across time zones knows how unpleasant it is when the regular rhythm of your biological clock is disrupted. Jetlag results when the body’s internal clock, or circadian rhythm is out of sync with external cues for “day and “night”, resulting in insomnia, extreme tiredness, difficulty concentrating and various other unpleasant symptoms.

On the bright side, jetlag is at least a temporary misery that is usually over after a few days of acclimation to the new time zone. Long-term disruption of the natural sleep/wake cycle, such as encountered by frequent long-distance travellers, shift workers, or people with physiological conditions that affect circadian rhythms, can be much more debilitating. Longer term health effects that have been associated with constant disruption of circadian rhythms include, insomnia, concentration problems, and increased susceptibility to diseases associated with chronic inflammation such as cancer, diabetes and cardiovascular disease.

Despite the fact that many of the genes and proteins involved in central control of circadian rhythms are known, the reason for the implied association between circadian clock components and immune function is not understood. Recently, a paper was published in the July issue of PNAS that identified a potential link between a circadian clock component and chronic inflammation. Continue reading “Molecular Connections Between Sleep Deprivation and Inflammation”

Nanotechnology Goes Green

Wouldn’t it be nice to have a renewable, inexpensive replacement for metals, non-organic plastics, and electrical components?  Less mining, less petrochemicals, less environmental stress— it’s not a far fetched, pie-in-the-sky idea anymore.  And the source for a super-substitute material is right in your back yard.

Nanocrystalline cellulose (NCC), a product of wood pulp, have been touted as a “wonder material” whose tensile strength—214 megapascals—is eight times that of stainless steel, almost twice as strong as cast iron, and nearly equal the strength of structural steel.  NCC is produced by gently removing hemicellulose and lignin from the wood which, incidentally, can be scrap wood such as twigs and sawdust.  The purified wood is milled and hydrolyzed to remove impurities.  What’s left is cellulose fibers suspended in water.  When the water is removed, the resulting paste of fibers that can be molded or spread into sheets and freeze dried.  As they dry, the approximately 200 nanometer long fibers join together by hydrogen bonds and create a super strong material that has also is very conductive.  These properties make NCC very attractive to the electronics and computing industries as well as defense.  The United States army is using NCC to make lightweight body armor and has tested it in applications such as ballistics.

Given the abundance of starting material and the incredibly physical properties of NCC, the interest in further developing the manufacturing base is huge.  On July 26th, the U.S. Forest Service Forest Products Laboratory opened a $1.7 million dollar nanocrystalline cellulose production facility right here in Madison, Wisconsin.  The intent of the facility is ramp up production quickly and, hopefully in a few years, be able to sell NCC for a few dollars a kilogram.

Curiosity Rover on Track for August 5 Landing

[wpvideo kN9KABwW]With the amazing, beyond belief success of the Mars Rovers Spirit and Opportunity, the expectations are high for Curiosity. However, the task is far more difficult. With a much larger rover to land, the landing is more difficult. If you haven’t seen NASA’s “Seven Minutes of Terror” video, it’s worth a look.

Where will you be on August 5? Will you be awake and holding your breath and watching your twitter feed—looking for the first news of a successful landing from NASA?

And Then There Were None, Or Were There? Lonesome George and the Giant Tortoises of the Galapagos Islands

This week science lost a celebrity of the most unusual sort. Known to people around the world as Lonesome George, he was recognized as the last living member of his subspecies, the Pinta giant tortoise (Geochelone abingdoni) one of the giant tortoises of the Galapagos Islands. These slow and steady creatures hold a special place in science history. Observing differences between the giant tortoise populations of different Galapagos Islands helped a young Charles Darwin develop his theory of evolution. Continue reading “And Then There Were None, Or Were There? Lonesome George and the Giant Tortoises of the Galapagos Islands”

Seeing the Potential

neuronal signalingI had never heard of Halorubrum sodomense until a few days ago. It’s name describes it pretty well, it is a salt-tolerant (Halophilic) organism that contains the red-colored photosynthetic pigment archaerhodopsin, and it was originally isolated from the region of Sodom near the Dead Sea. It’s an organism that is well-known only to those with reason to study it. Many of the rest of us will never have cause to say its name, or to even remember it, and may even occasionally wonder why it is studied at all.

Halorubrum sodomense was in the news recently because a genetically engineered form of its rhodopsin was used to create a method that lights up mammalian neurons as they fire. This exciting development was reported in a paper by Kralj et al, published in the Nov 27 issue of Nature Methods. Continue reading “Seeing the Potential”

Red Rover, Red Rover

[wpvideo j5SvPhHA]On November 26, NASA launched the Mars Science Laboratory from Cape Canaveral. The science laboratory contains the newest Mars rover, Curiosity. NASA has already received the first signal from the laboratory, shortly after it separated from the rocket. The Mars Science Laboratory is flying free toward the red planet.

NASA has a wonderful video describing how the science laboratory landing is planned. The video illustrates just how complex a mission this is. To think that we can even imagine, must less carry out, such a feat of technology and engineering is amazing. Enjoy the video, and let’s hope that on August 6, 2012, Curiosity will land safely and begin teaching us more about our neighboring planet.

If you have difficulty with the embedded video, here’s a link to the video on the NASA website.

A New Role for Reactive Oxygen Species: Can We be Aged and Thin?

Add pomegranite to the list of so-called superfoods.

Since the 1980s, we’ve been told that aging can be accelerated by a build-up of free radicals in our cells. We’ve learned that to counteract the damage that free radicals (or reactive oxygen species, ROS) can wreak on our bodies, we should consume  antioxidants like vitamins C and E, and phytochemicals.

In fact, the term “superfood” was coined for foods that contain high levels of antioxidants, phytochemicals and vitamins, foods like blueberries and carrots, spinach and kale, to name a few.

 “Hold the phone”, as a pre-calculus professor of mine used to say.  Turn off the blender and put down that shot glass of beet-carrot-lemon grass juice. This research just in: “Free Radicals Crucial to Suppressing Appetite”.

The research was published August 28, 2011 in the advanced online edition of Nature Medicine.

In this study, Yale University researchers reported that elevated levels of ROS  in the brain activated satiety-generating neurons. Continue reading “A New Role for Reactive Oxygen Species: Can We be Aged and Thin?”

A New Method that Marks Proteins for Destruction

The ability to manipulate genes and proteins and observe the effects of specific changes is a foundational aspect of molecular biology. From the first site-directed mutagenesis systems to the development of knockout mice and RNA interference, technologies for making targeted changes to specific proteins to eliminate their expression or alter their function have made tremendous contributions to scientific discovery.

A recent paper highlights a novel application of HaloTag technology to enable the targeted destruction of specific HaloTag fusion proteins in vivo. The paper, published online in the July issue of Nature Chemical Biology, details a promising new method with application for validation of potential drug targets by specific in vivo inhibition, and for studying the function of specific genes in organogenesis or disease development. Continue reading “A New Method that Marks Proteins for Destruction”

Worms from Heaven and Hell

C. elegans were recently part of an experiment on the International Space Station.

Worms from the heights of space and the depths of the earth were in the news last week, one well-known species soaring to the heavens as part of a space flight experiment and a previously undiscovered species revealing the surprising extent of multicellular life in the hidden depths of earth.

The Worm from the Heavens
Caenorhabditis elegans perhaps qualifies as the most well-known of all worms. This 1mm roundworm, is a staple model organism in molecular biology. It’s easy to grow and store, possesses a simple neuronal network, and is transparent, making it easy to study cell differentiation and development. It was the first multicellular organism to have its genome sequenced, and the developmental fate of all its somatic cells has been studied. In some ways we know C. elegans better than we know ourselves.

Continue reading “Worms from Heaven and Hell”

How “Happy” Wins

Volunteering sign “The science of happiness” is a catchy and promising title that was recently used for a series of articles on Newscientist.com.

So I took a look at some  research and found an intriguing report highlighted in a Wall Street Journal article “Is Happiness Overrated”. This article was about research done at the University of Wisconsin by Carol Ryff and Jennifer Morozink, et al. (1) .

It turns out that happiness is not only sometimes hard to find (personal communication), it can also be difficult to define. I learned that there is: 1) more than one kind of happiness and; 2) all happiness is not created equal.

Continue reading “How “Happy” Wins”